Papers

2020    2019    2018    2017    2016    2015    2014    2013    

2020

Calyam, P., N. Wilkins-Diehr, M. Miller, E. H. Brookes, R. Arora, A. Chourasia, D. M. Jennewein, V. Nandigam, M. Drew LaMar, S. B. Cleveland, G. Newman, S. Wang, I. Zaslavsky, M. A. Cianfrocco, K. Ellett, D. Tarboton, K. G. Jeffery, Z. Zhao, J. González-Aranda, M. J. Perri, G. Tucker, L. Candela, T. Kiss and S. Gesing, (2020), "Measuring success for a future vision: Defining impact in science gateways/virtual research environments," Concurrency and Computation: Practice and Experience, e6099, https://doi.org/10.1002/cpe.6099

Gan, T., Tarboton, D. G., Dash, P., Gichamo, T., Horsburgh, J. S. (2020). Integrating hydrologic modeling web services with online data sharing to prepare, store, and execute hydrologic models, Environmental Modelling & Software, https://doi.org/10.1016/j.envsoft.2020.104731.

Gan, T., Tarboton, D. G., Horsburgh, J. S., Dash, P., Idaszak, R., Yi, H. (2020). Collaborative sharing of multidimensional space-time data in a next generation hydrologic information system, Environmental Modelling & Software, 129, https://doi.org/10.1016/j.envsoft.2020.104706.

2019

Bandaragoda, C. J., A. Castronova, E. Istanbulluoglu, R. Strauch, S. S. Nudurupati, J. Phuong, J. M. Adams, N. M. Gasparini, K. Barnhart, E. W. H. Hutton, D. E. J. Hobley, N. J. Lyons, G. E. Tucker, D. G. Tarboton, R. Idaszak and S. Wang, (2019), "Enabling collaborative numerical Modeling in Earth sciences using Knowledge Infrastructure," Environmental Modelling & Software, 120: 104424, https://doi.org/10.1016/j.envsoft.2019.03.020. 

Leonard, L., B. Miles, B. Heidari, L. Lin, A. M. Castronova, B. Minsker, J. Lee, C. Scaife and L. E. Band, (2019), "Development of a participatory Green Infrastructure design, visualization and evaluation system in a cloud supported jupyter notebook computing environment," Environmental Modelling & Software, 111: 121-133, https://doi.org/10.1016/j.envsoft.2018.10.003.

Lyu, F., D. Yin, A. Padmanabhan, Y. Choi, J. L. Goodall, A. Castronova, D. Tarboton and S. Wang, (2019), "Reproducible Hydrological Modeling with CyberGIS-Jupyter: A Case Study on SUMMA," Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), Chicago, IL, USA, ACM, 1-6, https://doi.org/10.1145/3332186.3333052.

Padmanabhan, A., D. Yin, F. Lyu and S. Wang, (2019), "Bridging Local Cyberinfrastructure and XSEDE with CyberGIS-Jupyter," Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), Chicago, IL, USA, ACM, 1-3, http://doi.org/10.1145/3332186.3333257

Wilkins-Diehr, N., M. Miller, E. H. Brookes, R. Arora, A. Chourasia, P. Calyam, D. M. Jennewein, V. Nandigam, M. D. LaMar, S. B. Cleveland, G. Newman, S. Wang, I. Zaslavsky, M. A. Cianfrocco, K. Ellett and D. Tarboton, (2019), "Measuring Success: How Science Gateways Define Impact,"  Gateways 2019, San Diego, CA, http://doi.org/10.17605/OSF.IO/TKZUY. 

Xue, Z., A. Couch and D. Tarboton, (2019), "Map based discovery of hydrologic data in the HydroShare collaboration environment," Environmental Modelling & Software, 111: 24-33, https://doi.org/10.1016/j.envsoft.2018.09.014.

Zhang, Z., H. Hu, D. Yin, S. Kashem, R. Li, H. Cai, D. Perkins and S. Wang, (2019), "A cyberGIS-enabled multi-criteria spatial decision support system: A case study on flood emergency management," International Journal of Digital Earth, 12(11): 1364-1381, http://doi.org/10.1080/17538947.2018.1543363.

2018

Yi, H., R. Idaszak, M. Stealey, C. Calloway, A. L. Couch and D. G. Tarboton, (2018), "Advancing distributed data management for the HydroShare hydrologic information system," Environmental Modelling & Software, 102: 233-240, https://doi.org/10.1016/j.envsoft.2017.12.008.

Essawy, B. T., J. L. Goodall, W. Zell, D. Voce, M. M. Morsy, J. Sadler, Z. Yuan and T. Malik, (2018), "Integrating scientific cyberinfrastructures to improve reproducibility in computational hydrology: Example for HydroShare and GeoTrust," Environmental Modelling & Software, 105: 217-229, https://doi.org/10.1016/j.envsoft.2018.03.025.

Yin, D., Y. Liu, H. Hu, J. Terstriep, X. Hong, A. Padmanabhan and S. Wang, (2018), "CyberGIS-Jupyter for reproducible and scalable geospatial analytics," Concurrency and Computation: Practice and Experience: e5040, https://doi.org/10.1002/cpe.5040.

2017

Idaszak, R., S. Ahalt, K. Bradford, C. Calloway, C. Castillo, J. Coposky, J. Crabtree, S. Davis, Y. Guo, F. Jiang, A. Krishnamurthy, H. Lander, W. C. Lenhardt, A. Rajasekar, K. Robasky, T. Russell, E. Scott, D. Sizemore, M. Stealey, H. Xu, H. Yi and W. Zhang, (2017), "xDCI  - Accelerating Data Cyberinfrastructure and Research for Community Science Gateways," Gateways 2017, University of Michigan, Ann Arbor, MI, October 23-25, https://doi.org/10.6084/m9.figshare.5483701.v1.

Crawley, S., D. Ames, Z. Li and D. Tarboton, (2017), "HydroShare GIS: Visualizing Spatial Data in the Cloud," Open Water Journal, 4(1): 3-20, http://scholarsarchive.byu.edu/openwater/vol4/iss1/2.

Morsy, M. M., J. L. Goodall, A. M. Castronova, P. Dash, V. Merwade, J. M. Sadler, M. A. Rajib, J. S. Horsburgh and D. G. Tarboton, (2017), "Design of a metadata framework for environmental models with an example hydrologic application in HydroShare," Environmental Modelling & Software, 93: 13-28, http://dx.doi.org/10.1016/j.envsoft.2017.02.028.

Idaszak, R., D. G. Tarboton, H. Yi, L. Christopherson, M. J. Stealey, B. Miles, P. Dash, A. Couch, C. Spealman, D. P. Ames and J. S. Horsburgh, (2017), "HydroShare - A case study of the application of modern software engineering to a large distributed federally-funded scientific software development project," Chapter 10 in Software Engineering for Science, Edited by J. Carver, N. P. C. Hong and G. K. Thiruvathukal, Taylor&Francis CRC Press, p.219-233.

2016

Goodall, J. L., V. Merwade, I. Zaslavsky, D. G. Tarboton, J. S. Horsburgh, D. P. Ames and A. Couch, (2016), "Hydrologic Information Systems. ," Chapter 7 in Handbook of Applied Hydrology, Edited by V. P. Singh, McGraw Hill, p.7-1 to 7-9.

Swain, N. R., S. D. Christensen, A. D. Snow, H. Dolder, G. Espinoza-Dávalos, E. Goharian, N. L. Jones, E. J. Nelson, D. P. Ames and S. J. Burian, (2016), "A new open source platform for lowering the barrier for environmental web app development," Environmental Modelling & Software, 85: 11-26, http://dx.doi.org/10.1016/j.envsoft.2016.08.003.

Horsburgh, J. S., M. M. Morsy, A. M. Castronova, J. L. Goodall, T. Gan, H. Yi, M. J. Stealey and D. G. Tarboton, (2016), "HydroShare: Sharing Diverse Environmental Data Types and Models as Social Objects with Application to the Hydrology Domain," JAWRA Journal of the American Water Resources Association, 52(4): 873-889, http://dx.doi.org/10.1111/1752-1688.12363.

Kadlec, J., A. W. Miller and D. P. Ames, (2016), "Extracting Snow Cover Time Series Data from Open Access Web Mapping Tile Services," JAWRA Journal of the American Water Resources Association, 52(4): 916-932, http://dx.doi.org/10.1111/1752-1688.12387.

Kadlec, J., StClair, B., Ames, D.P., Gill, R., 2015. WaterML R Package for Managing Ecological Experiment Data on a CUAHSI HydroServer. Ecological Informatics, 28, pp. 19-28 http://dx.doi.org/10.1016/j.ecoinf.2015.05.002.  

Sadler, J., Ames, D.P., Livingston, S.J., 2016. Extending HydroShare to enable hydrologic time series data as social media. J. Hydroinformatics, 18(2), pp. 198-209. http://dx.doi.org/10.2166/hydro.2015.331.

Sadler, J., Ames, D.P., Khattar, R., 2016. A Recipe for Standards-Based Data Sharing using Open Source Software and Low-Cost Electronics. J. Hydroinformatics, 18(2), pp. 185-197. http://dx.doi.org/10.2166/hydro.2015.092.  

Rajib M. A., V. Merwade, I Luk Kim, L. Zhao, C. X. Song and S. Zhe (2016), SWATShare – A web platform for collaborative research and education through online sharing, simulation and visualization of SWAT models, Environmental Modelling and Software, 75, 498-512. doi:10.1016/j.envsoft.2015.10.032

2015

Miles, B. and L. Band, (2015), "Ecohydrology Models without Borders?," 31 in Environmental Software Systems. Infrastructures, Services and Applications, Edited by R. Denzer, R. Argent, G. Schimak and J. Hřebíček, 448, IFIP Advances in Information and Communication Technology, Springer International Publishing, p.311-320, http://dx.doi.org/10.1007/978-3-319-15994-2_31.

Swain, N. R., K. Latu, S. D. Christensen, N. L. Jones, E. J. Nelson, D. P. Ames and G. P. Williams, (2015), "A review of open source software solutions for developing water resources web applications," Environmental Modelling & Software, 67: 108-117, http://dx.doi.org/10.1016/j.envsoft.2015.01.014.

Couch, A., D. Tarboton, R. Idaszak, J. Horsburgh, H. Yi and M. Stealey, (2015), "A Flexible File Sharing Mechanism for iRODS,"  iRODS User Group Meeting, Chapel Hill, iRODS Consortium, 61-68, https://hydrology.usu.edu/dtarb/Couch_iRODS_2015.pdf. [Video]

2014

Tarboton, D. G., R. Idaszak, J. S. Horsburgh, J. Heard, D. Ames, J. L. Goodall, L. E. Band, V. Merwade, A. Couch, J. Arrigo, R. Hooper, D. Valentine and D. Maidment, (2014), "A Resource Centric Approach for Advancing Collaboration Through Hydrologic Data and Model Sharing,"  11th International Conference on Hydroinformatics, HIC 2014, New York City, USA, Paper 314, http://academicworks.cuny.edu/cc_conf_hic/314/.

Heard, J., D. Tarboton, R. Idaszak, J. Horsburgh, D. Ames, A. Bedig, A. M. Castronova, A. Couch, P. Dash, C. Frisby, T. Gan, J. Goodall, S. Jackson, S. Livingston, D. Maidment, N. Martin, B. Miles, S. Mills, J. Sadler, D. Valentine and L. Zhao, (2014), "An Architectural Overview of Hydroshare, A Next-Generation Hydrologic Information System,"  11th International Conference on Hydroinformatics, HIC 2014, New York City, USA, Paper 311, http://academicworks.cuny.edu/cc_conf_hic/311/.

Rajib, M. A., V. Merwade, I. L. Kim, S. Zhe, L. Zhao and C. Song, (2014), "SWATShare – A Web-Portal For Hydrology Research And Education Using Soil Water And Assessment Tool,"  11th International Conference on Hydroinformatics, New York City, USA, Paper 463, http://academicworks.cuny.edu/cc_conf_hic/463.

Frisby, C., D. P. Ames and N. Martin, (2014), "Client-Server Hydrologic Data Exchange – Making the (Use) Case for Desktop Applications," in D. P. Ames, N. W. T. Quinn and A. E. Rizzoli (eds), Proceedings of the 7th International Congress on Environmental Modelling and Software, June 15-19, 2014, San Diego, California, USA, International Environmental Modelling and Software Society (iEMSs), ISBN: 978-88-9035-744-2, DOI:10.13140/2.1.1548.0964.

Tarboton, D. G., R. Idaszak, J. S. Horsburgh, J. Heard, D. Ames, J. L. Goodall, L. Band, V. Merwade, A. Couch, J. Arrigo, R. Hooper, D. Valentine and D. Maidment, (2014), "HydroShare: Advancing Collaboration through Hydrologic Data and Model Sharing," in D. P. Ames, N. W. T. Quinn and A. E. Rizzoli (eds), Proceedings of the 7th International Congress on Environmental Modelling and Software, San Diego, California, USA, International Environmental Modelling and Software Society (iEMSs), ISBN: 978-88-9035-744-2, https://scholarsarchive.byu.edu/iemssconference/2014/Stream-A/7/.

Morsy, M. M., J. L. Goodall, C. Bandaragoda, A. M. Castronova and J. Greenberg, (2014), "Metadata for Describing Water Models," in D. P. Ames, N. W. T. Quinn and A. E. Rizzoli (eds), Proceedings of the 7th International Congress on Environmental Modelling and Software, San Diego, California, USA, June 15-19, 2014, International Environmental Modelling and Software Society (iEMSs), ISBN: 978-88-9035-744-2, https://scholarsarchive.byu.edu/cgi/viewcontent.cgi?article=1001&context=iemssconference.

2013

Merwade, V., C. Song, L. Zhao. S. Zhe and M. A. Rajib, SWATShare – A portal for sharing, publishing, and running SWAT models using XSEDE resources, Proceedings of the 2013 SWAT Users Conference and Workshops, July 2013, Toulouse, France. http://swat.tamu.edu/media/114650/2013-swat-conference-proceedings-secured.pdf